Initial, very basic framework for running comparison tests
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.gitignore
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!/saved_models/.gitkeep
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!/datasets/.gitkeep
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/config.py
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config.example.py
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config.example.py
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MODEL_STORAGE_BASE_PATH = "/path/to/this/project/saved_models"
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DATASET_STORAGE_BASE_PATH = "/path/to/this/project/datasets"
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TEST_RUNS = [
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{
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'name': "Basic test run",
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'encoder_model': "models.base_encoder.BaseEncoder",
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'encoder_kwargs': {},
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'dataset_model': "models.base_dataset.BaseDataset",
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'dataset_kwargs': {},
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'corruption_model': "models.base_corruption.NoCorruption",
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'corruption_kwargs': {},
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},
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]
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0
datasets/.gitkeep
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0
datasets/.gitkeep
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57
main.py
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main.py
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import importlib
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import config
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import logging
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from models.base_corruption import BaseCorruption
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from models.base_dataset import BaseDataset
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from models.base_encoder import BaseEncoder
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from models.test_run import TestRun
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logger = logging.getLogger("main.py")
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logger.setLevel(logging.DEBUG)
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ch = logging.StreamHandler()
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ch.setLevel(logging.DEBUG)
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formatter = logging.Formatter('%(asctime)s - %(name)s - %(levelname)s - %(message)s')
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ch.setFormatter(formatter)
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logger.addHandler(ch)
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def load_dotted_path(path):
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split_path = path.split(".")
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modulename, classname = ".".join(split_path[:-1]), split_path[-1]
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model = getattr(importlib.import_module(modulename), classname)
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return model
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def run_tests():
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for test in config.TEST_RUNS:
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logger.info(f"Running test run '{test['name']}'...")
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# Load dataset model
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dataset_model = load_dotted_path(test['dataset_model'])
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assert issubclass(dataset_model, BaseDataset), f"Invalid dataset_model: '{dataset_model.__name__}', should be subclass of BaseDataset."
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logger.debug(f"Using dataset model '{dataset_model.__name__}'")
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# Load auto-encoder model
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encoder_model = load_dotted_path(test['encoder_model'])
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assert issubclass(encoder_model, BaseEncoder), f"Invalid encoder_model: '{encoder_model.__name__}', should be subclass of BaseEncoder."
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logger.debug(f"Using encoder model '{encoder_model.__name__}'")
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# Load corruption model
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corruption_model = load_dotted_path(test['corruption_model'])
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assert issubclass(corruption_model, BaseCorruption), f"Invalid corruption_model: '{corruption_model.__name__}', should be subclass of BaseCorruption."
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logger.debug(f"Using corruption model '{corruption_model.__name__}'")
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# Create TestRun instance
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test_run = TestRun(dataset=dataset_model(**test['dataset_kwargs']),
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encoder=encoder_model(**test['encoder_kwargs']),
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corruption=corruption_model(**test['corruption_kwargs']))
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# Run TestRun
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test_run.run()
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if __name__ == '__main__':
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run_tests()
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0
models/__init__.py
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0
models/__init__.py
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models/base_corruption.py
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models/base_corruption.py
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from models.base_dataset import BaseDataset
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class BaseCorruption:
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"""
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Base corruption model that is not implemented.
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"""
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name = "BaseCorruption"
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def __init__(self, name: str = None):
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if name is not None:
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self.name = name
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def __str__(self):
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return f"{self.name}"
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@classmethod
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def corrupt(cls, dataset: BaseDataset) -> BaseDataset:
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raise NotImplementedError()
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class NoCorruption(BaseCorruption):
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"""
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Corruption model that does not corrupt the dataset at all.
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"""
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name = "No corruption"
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@classmethod
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def corrupt(cls, dataset: BaseDataset) -> BaseDataset:
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return dataset
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models/base_dataset.py
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models/base_dataset.py
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import math
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from typing import Union, Optional
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class BaseDataset:
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# Train amount is either a proportion of data that should be used as training data (between 0 and 1),
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# or an integer indicating how many entries should be used as training data (e.g. 1000, 2000)
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#
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# So 0.2 would mean 20% of all data in the dataset (200 if dataset is 1000 entries) is used as training data,
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# and 1000 would mean that 1000 entries are used as training data, regardless of the size of the dataset.
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TRAIN_AMOUNT = 0.2
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name = "BaseDataset"
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_source_path = None
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_data = None
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_trainset: 'BaseDataset' = None
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_testset: 'BaseDataset' = None
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def __init__(self, name: Optional[str] = None):
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if name is not None:
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self.name = name
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def __str__(self):
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if self._data is not None:
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return f"{self.name} ({len(self._data)} objects)"
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else:
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return f"{self.name} (no data loaded)"
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@classmethod
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def get_new(cls, name: str, data: Optional[list] = None, source_path: Optional[str] = None,
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train_set: Optional['BaseDataset'] = None, test_set: Optional['BaseDataset'] = None):
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dset = cls()
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dset._data = data
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dset._source_path = source_path
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dset._trainset = train_set
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dset._testset = test_set
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return dset
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def load(self, name: str, path: str):
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self.name = str
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self._source_path = path
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raise NotImplementedError()
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def _subdivide(self, amount: Union[int, float]):
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if self._data is None:
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raise ValueError("Cannot subdivide! Data not loaded, call `load()` first to load data")
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if isinstance(amount, float) and 0 < amount < 1:
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size_train = math.floor(len(self._data) * amount)
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train_data = self._data[:size_train]
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test_data = self._data[size_train:]
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elif isinstance(amount, int) and amount > 0:
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train_data = self._data[:amount]
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test_data = self._data[amount:]
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else:
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raise ValueError("Cannot subdivide! Invalid amount given, "
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"must be either a fraction between 0 and 1, or an integer.")
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self._trainset = self.__class__.get_new(name=f"{self.name} Training", data=train_data, source_path=self._source_path)
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self._testset = self.__class__.get_new(name=f"{self.name} Testing", data=test_data, source_path=self._source_path)
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def get_train(self) -> 'BaseDataset':
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if not self._trainset or not self._testset:
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self._subdivide(self.TRAIN_AMOUNT)
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return self._trainset
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def get_test(self) -> 'BaseDataset':
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if not self._trainset or not self._testset:
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self._subdivide(self.TRAIN_AMOUNT)
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return self._testset
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models/base_encoder.py
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models/base_encoder.py
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from typing import Optional
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from models.base_dataset import BaseDataset
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class BaseEncoder:
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name = "BaseEncoder"
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def __init__(self, name: Optional[str] = None):
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if name is not None:
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self.name = name
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def __str__(self):
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return f"{self.name}"
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def train(self, dataset: BaseDataset):
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raise NotImplementedError()
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def test(self, dataset: BaseDataset):
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raise NotImplementedError()
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models/test_run.py
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models/test_run.py
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from models.base_corruption import BaseCorruption
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from models.base_dataset import BaseDataset
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from models.base_encoder import BaseEncoder
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class TestRun:
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dataset: BaseDataset = None
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encoder: BaseEncoder = None
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corruption: BaseCorruption = None
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def __init__(self, dataset: BaseDataset, encoder: BaseEncoder, corruption: BaseCorruption):
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self.dataset = dataset
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self.encoder = encoder
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self.corruption = corruption
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def run(self):
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if self.dataset is None:
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raise ValueError("Cannot run test! Dataset is not specified.")
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if self.encoder is None:
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raise ValueError("Cannot run test! AutoEncoder is not specified.")
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if self.corruption is None:
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raise ValueError("Cannot run test! Corruption method is not specified.")
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return self._run()
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def _run(self):
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raise NotImplementedError()
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def get_metrics(self):
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raise NotImplementedError()
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0
saved_models/.gitkeep
Normal file
0
saved_models/.gitkeep
Normal file
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